Index A | C | D | E | F | G | I | K | M | N | O | P | R | S | T | V | W A add_filehandler() (in module workflowpy.log) all_fields (workflowpy.Parameters property) C check_input_output_paths() (workflowpy.Method method) check_output_exists() (workflowpy.Method method) configuration create_rule() (workflowpy.Workflow method) create_rule_from_kwargs() (workflowpy.Workflow method) D dict (workflowpy.Method property) dryrun() (workflowpy.Method method) (workflowpy.Rule method) (workflowpy.Workflow method) E engine expand_wildcards (workflowpy.ExpandMethod property) ExpandMethod (class in workflowpy) F from_kwargs() (workflowpy.Method class method) from_yaml() (workflowpy.Workflow class method) G get() (workflowpy.Wildcards method) get_output_for_wildcards() (workflowpy.ExpandMethod method) get_ref() (workflowpy.Workflow method) I input (workflowpy.Method property) (workflowpy.Rule property) K keys (workflowpy.WorkflowConfig property) M method Method (class in workflowpy) method_instances (workflowpy.Rule property) model_config (workflowpy.Parameters attribute) (workflowpy.Wildcards attribute) (workflowpy.WorkflowConfig attribute) model_post_init() (workflowpy.Parameters method) N n_runs (workflowpy.Rule property) names (workflowpy.Wildcards property) O output (workflowpy.Method property) (workflowpy.Rule property) output_expanded (workflowpy.ExpandMethod property) P Parameters (class in workflowpy) params (workflowpy.Method property) plot_rulegraph() (workflowpy.Workflow method) R ReduceMethod (class in workflowpy) root (workflowpy.Workflow property) rule Rule (class in workflowpy) run() (workflowpy.Method method) (workflowpy.Rule method) (workflowpy.Workflow method) S ScriptInput (class in workflowpy.methods.script) ScriptMethod (class in workflowpy.methods.script) ScriptOutput (class in workflowpy.methods.script) ScriptParams (class in workflowpy.methods.script) set() (workflowpy.Wildcards method) set_expand_wildcard() (workflowpy.ExpandMethod method) setuplog() (in module workflowpy.log) T test_method() (workflowpy.Method method) to_cwl() (workflowpy.Workflow method) to_dict() (workflowpy.Method method) (workflowpy.Parameters method) (workflowpy.Rule method) (workflowpy.Wildcards method) (workflowpy.WorkflowConfig method) to_kwargs() (workflowpy.Method method) to_snakemake() (workflowpy.Workflow method) to_yaml() (workflowpy.Workflow method) V values (workflowpy.Wildcards property) (workflowpy.WorkflowConfig property) W wildcard_fields (workflowpy.Rule property) wildcards Wildcards (class in workflowpy) wildcards (workflowpy.Rule property) (workflowpy.Wildcards attribute) workflow Workflow (class in workflowpy) workflow (workflowpy.Rule property) WorkflowConfig (class in workflowpy)
